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Bacteria have been around for 3.5 billion years longer than we have.  They’ve gotten good at genetic engineering and they can do it with a generation time of 20 minutes under optimum circumstances..
 
Bacteria can alter their genetic material in many more ways than higher animals.  Unlike higher animals, bacteria posses both chromosomal and plasmid DNA.  Resistance can be acquired by:
Chromosomal Mutation with vertical transmission to progeny
Horizontal Transfer of Resistance Genes by plasmids, integrons, bacteriophages and scavenging into either plasmid or chromosomal DNA.
Resistance genes often travel in cassettes on integrons or in clusters on plasmids, so selection driven by the presence of a single antibiotic can simultaneously select for resistance to multiple antibiotic classes.
Horizontal gene transfer occurs not just intra-species, but inter-species as well.